个人简历：
简建波 副教授
联系方式：jbjian@stu.edu.cn
具有15年以上生物信息分析及多组学研究经验。2019年获基因组学副研究员职称, 2024年获研究员职称。合作主导完成科研大型合作项目数十个, 其他类型项目上百个。在国内外学术会议做报告十多次, 在国际学术期刊发表论文70多篇, 总影响因子600+, 被他引数4600+; 以第一或通讯（含共同）作者在Nature、Nature Communications、Plant Biotechnology Journal、Plant Journal和Molecular Ecology Resources等期刊发表论文40篇; 以参与作者在Nature、Nature Genetics、Nature Ecology & Evolution、Nature Communications和PNAS等顶级期刊发表论文多篇。 众多SCI杂志审稿人, BMC genomics杂志编委，GigaScience青年编委。已参与授权发明专利5项, 已受理阶段发明专利7项, 软件著作1项。
主要研究方向及兴趣：
生物信息学/基因组学; 利用多组学技术研究物种的演化、性状及遗传改良机制。
教育经历：
2015.09 - 2019.06 汕头大学 海洋生物学 博士
2007.09 - 2010.06 汕头大学 海洋生物学 硕士
2002.09 - 2006.07 南昌大学 生物工程 本科
工作经历：
2010.01 -2025.08 华大基因（BGI） 历任技术、研发、生物信息分析及项目负责人等岗位；曾任华大科技科研合作部总监。
2025.09—至今 汕头大学 理学院 副教授
承担项目：
目前在研主持汕头大学卓越优秀人才项目
研究成果：
近几年部分代表性论文（第一作或通讯作者，含共同）：
1. Zhou, Y., Wang, C., Wang, B., Xu, D., Zhang, X., Ge, Y., Jiang S., Tang F., Chen C., Li X., Jian J*., You, Y*. (2025). Telomere-to-telomere genome and resequencing of 231 individuals reveal evolution, genomic footprints in Asian icefish, Protosalanx chinensis. Gigascience, 14. (*co-corresponding author). IF-5 year: 9.4
2. Wan, J.-N#., Wang, S.-W#., Leitch, A. R#., Leitch, I. J#., Jian, J.-B#., Wu, Z.-Y., Xin, H.-P., Rakotoarinivo, M., Onjalalaina, G. E., Gituru, R. W., Dai, C., Mwachala, G., Bai, M.-Z., Zhao, C.-X., Wang, H.-Q., Du, S.-L., Wei, N., Hu, G.-W., Chen, S.-C., Chen, X.-Y., Wan, T*., & Wang, Q.-F* (2024). The rise of baobab trees in Madagascar. Nature (#co-first author). 中科院一区，IF-5 year: 54.4
3. Jian, J#., P. Torres-Montero#, M. Bai, Y. Lu and H. T. Simonsen* (2024). "Genome analysis of Chlorella vulgaris (CCAP 211/12) mutants provided insight into the molecular basis of chlorophyll deficiency." Algal Research 78. (#co-first author). IF-5 year: 4.8
4. Jian, J#., Wang, Z., Chen, C., Workman, C. T., Fang, X., Larsen, T. O., Guo, J*., Sonnenschein, E. C* (2024). Two high-quality Prototheca zopfii genomes provide new insights into their evolution as obligate algal heterotrophs and their pathogenicity. Microbiology spectrum 12: e04148-04123. IF-5 year: 4.2
5. Chu, L#., K. Yang#, C. Chen#, B. Zhao#, Y. Hou, W. Wang, P. Zhao, K. Wang, B. Wang, Y. Xiao, Y. Li, Y. Li, Q. Song, B. Liu, R. Fan, A. Bohra, J. Yu, E. C. Sonnenschein, R. K. Varshney*, Z. Tian*, J. Jian* and P. Wan* (2024) Chromosome-level reference genome and resequencing of 322 accessions reveal evolution, genomic imprint and key agronomic traits in adzuki bean. Plant Biotechnology Journal., 22: 2173-2185. (*co-corresponding author). 中科院一区，IF-5 year: 11.6
6. Yin, D#., C. Chen#, D. Lin#, Z. Hua, C. Ying, J. Zhang, C. Zhao, Y. Liu, Z. Cao, H. Zhang, C. Wang, L. Liang, P. Xu, J. Jian* and K. Liu* (2024). "Telomere-to-telomere gap-free genome assembly of the endangered Yangtze finless porpoise and East Asian finless porpoise." GigaScience 13. (*co-corresponding author). IF-5 year: 9.4
7. Wang, B#., B. Wu#, X. Liu#, Y. Hu#, Y. Ming#, M. Bai#, J. Liu, K. Xiao, Q. Zeng, J. Yang, H. Wang, B. Guo, C. Tan, Z. Hu, X. Zhao, Y. Li, Z. Yue, J. Mei, W. Jiang, Y. Yang, Z. Li, Y. Gao, L. Chen*, J. Jian* and H. Du* (2024). Whole Genome Sequencing Reveals Autooctoploidy in the Chinese Sturgeon and its Evolutionary Trajectories. Genomics, Proteomics & Bioinformatics. 22(1): 1-15 (*co-corresponding author). 中科院一区，IF-5 year: 10.3. 封面文章
8. Yuan, J#*., S. Jiang#, J. Jian#, M. Liu, Z. Yue, J. Xu, J. Li, C. Xu, L. Lin, Y. Jing, X. Zhang, H. Chen, L. Zhang, T. Fu, S. Yu, Z. Wu, Y. Zhang, C. Wang, X. Zhang, L. Huang, H. Wang, D. Hong*, X. Y. Chen* and Y. Hu* (2022). Genomic basis of the giga-chromosomes and giga-genome of tree peony Paeonia ostii. Nature Communications, 13. (#co-first author). 中科院一区，IF-5 year: 16.1
9. Li, H. L#., L. Wu#, Z. Dong#, Y. Jiang#, S. Jiang#, H. Xing, Q. Li, G. Liu, S. Tian, Z. Wu, W. Bin, Z. Li, P. Zhao, Y. Zhang, J. Tang, J. Xu, K. Huang, X. Liu, W. Zhang, Q. Liao, Y. Ren, X. Huang, Q. Li, C. Li, Y. Wang, B. Xavier-Ravi, H. Li, Y. Liu, T. Wan, Q. Liu, Y. Zou*, J. Jian*, Q. Xia* and Y. Liu* (2021). "Haplotype-resolved genome of diploid ginger (Zingiber officinale) and its unique gingerol biosynthetic pathway." Horticulture Research 8(1): 189. (*co-corresponding author).中科院一区，IF-5 year: 8.2.封面文章
10. Ji, Y. T#., Z. Xiu#, C. H. Chen#, Y. Wang#, J. X. Yang#, J. J. Sui#, S. J. Jiang, P. Wang, S. Y. Yue, Q. Q. Zhang, J. L. Jin, G. S. Wang, Q. Q. Wei, B. Wei, J. Wang, H. L. Zhang, Q. Y. Zhang, J. Liu, C*. J. Liu*, J. B. Jian* and C. Q. Qu* (2021). “Long read sequencing of Toona sinensis (A. Juss) Roem: a chromosome-level reference genome for the Meliaceae family.” Molecular Ecology Resources 21(4): 1243-1255. (*co-corresponding author). 中科院一区，IF-5 year: 7.8
11. Jian, J#., L. Yang#, X. Gan#, B. Wu#, L. Gao, H. Zeng, X. Wang, Z. Liang, Y. Wang, L. Fang, J. Li, S. Jiang, K. Du, B. Fu, M. Bai, M. Chen, X. Fang, H. Liu and S. He* (2020). "Whole genome sequencing of silver carp (Hypophthalmichthys molitrix) and bighead carp (Hypophthalmichthys nobilis) provide novel insights into their evolution and speciation." Molecular Ecology Resources 21(3): 912-923. (#co-first author). 中科院一区，IF-5 year: 7.8
12. Wang, P#., G. Zhou#, J. Jian#, H. Yang, D. Renshaw, M. K. Aubert, J. Clements, T. He*, M. Sweetingham* and C. Li* (2020) Whole-genome assembly and re-sequencing reveal genomic imprint and key genes of rapid domestication in narrow-leafed lupin. The Plant Journal 105(5): 1192-1210. (#co-first author). 中科院一区，IF-5 year: 7.1
13. Liu, Z#., H. Zhu#, J. Zhou#, S. Jiang#, Y. Wang, J. Kuang, Q. Ji, J. Peng, J. Wang, L. Gao, M. Bai, J. Jian* and W. Ke* (2020) Resequencing of 296 cultivated and wild lotus accessions unravels its evolution and breeding history. The Plant Journal 104(6): 1673-1684. (*co-corresponding author). 中科院一区，IF-5 year: 7.1
